leidenbase: R and C/C++ Wrappers to Run the Leiden find_partition() Function

An R to C/C++ interface that runs the Leiden community detection algorithm to find a basic partition (). It runs the equivalent of the 'leidenalg' find_partition() function, which is given in the 'leidenalg' distribution file 'leiden/src/functions.py'. This package includes the required source code files from the official 'leidenalg' distribution and functions from the R 'igraph' package. The 'leidenalg' distribution is available from <https://github.com/vtraag/leidenalg/> and the R 'igraph' package is available from <https://igraph.org/r/>. The Leiden algorithm is described in the article by Traag et al. (2019) <doi:10.1038/s41598-019-41695-z>. Leidenbase includes code from the packages: igraph version 0.9.8 with license GPL (>= 2), leidenalg version 0.8.10 with license GPL 3.

Version: 0.1.30
Depends: R (≥ 3.5.0)
Imports: igraph (≥ 0.9.0)
Suggests: rmarkdown, knitr, testthat (≥ 3.1.0), pandoc
Published: 2024-07-10
DOI: 10.32614/CRAN.package.leidenbase
Author: Brent Ewing [aut, cre], Vincent Traag [ctb], Gábor Csárdi [ctb], Tamás Nepusz [ctb], Szabolcs Horvat [ctb], Fabio Zanini [ctb]
Maintainer: Brent Ewing <bge at uw.edu>
BugReports: https://github.com/cole-trapnell-lab/leidenbase/issues
License: GPL-3
URL: https://github.com/cole-trapnell-lab/leidenbase
NeedsCompilation: yes
Materials: NEWS
CRAN checks: leidenbase results


Reference manual: leidenbase.pdf
Vignettes: leidenbase


Package source: leidenbase_0.1.30.tar.gz
Windows binaries: r-devel: leidenbase_0.1.27.zip, r-release: leidenbase_0.1.30.zip, r-oldrel: leidenbase_0.1.27.zip
macOS binaries: r-release (arm64): leidenbase_0.1.30.tgz, r-oldrel (arm64): leidenbase_0.1.30.tgz, r-release (x86_64): leidenbase_0.1.30.tgz, r-oldrel (x86_64): leidenbase_0.1.30.tgz
Old sources: leidenbase archive

Reverse dependencies:

Reverse imports: monocle


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