genekitr: Gene Analysis Toolkit

Provides features for searching, converting, analyzing, plotting, and exporting data effortlessly by inputting feature IDs. Enables easy retrieval of feature information, conversion of ID types, gene enrichment analysis, publication-level figures, group interaction plotting, and result export in one Excel file for seamless sharing and communication.

Version: 1.2.7
Depends: R (≥ 3.6)
Imports: clusterProfiler, dplyr, europepmc, fst, geneset, ggplot2, ggraph, ggvenn, igraph, magrittr, openxlsx, stringr, stringi, tidyr, rlang
Suggests: AnnotationDbi, cowplot, ComplexUpset, forcats, fgsea, futile.logger, ggplotify, ggsci, ggrepel, ggridges, ggnewscale, GOplot, GOSemSim, labeling, pheatmap, tm, treemap, RColorBrewer, RCurl, reshape2, rio, rrvgo, testthat (≥ 3.0.0), wordcloud, knitr, rmarkdown, XML, xml2, httr
Published: 2024-06-06
DOI: 10.32614/CRAN.package.genekitr
Author: Yunze Liu ORCID iD [aut, cre]
Maintainer: Yunze Liu <jieandze1314 at>
License: GPL-3
NeedsCompilation: no
Materials: README ChangeLog
CRAN checks: genekitr results


Reference manual: genekitr.pdf


Package source: genekitr_1.2.7.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): genekitr_1.2.7.tgz, r-oldrel (arm64): genekitr_1.2.7.tgz, r-release (x86_64): genekitr_1.2.7.tgz, r-oldrel (x86_64): genekitr_1.2.7.tgz
Old sources: genekitr archive

Reverse dependencies:

Reverse imports: MIRit


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