FuncDiv: Compute Contributional Diversity Metrics

Compute alpha and beta contributional diversity metrics, which is intended for linking taxonomic and functional microbiome data. See 'GitHub' repository for the tutorial: <>. Citation: Gavin M. Douglas, Sunu Kim, Morgan G. I. Langille, B. Jesse Shapiro (2023) <doi:10.1093/bioinformatics/btac809>.

Version: 1.0.0
Depends: R (≥ 3.5.0)
Imports: ape, collapse, data.table, parallel, parallelDist, Rcpp, RcppParallel, RcppXPtrUtils, stats
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
Suggests: testthat (≥ 3.0.0)
Published: 2023-03-08
Author: Gavin Douglas ORCID iD [aut, cre]
Maintainer: Gavin Douglas <gavinmdouglas at>
License: AGPL-3
NeedsCompilation: yes
Citation: FuncDiv citation info
Materials: README
CRAN checks: FuncDiv results


Reference manual: FuncDiv.pdf


Package source: FuncDiv_1.0.0.tar.gz
Windows binaries: r-prerel:, r-release:, r-oldrel:
macOS binaries: r-prerel (arm64): FuncDiv_1.0.0.tgz, r-release (arm64): FuncDiv_1.0.0.tgz, r-oldrel (arm64): FuncDiv_1.0.0.tgz, r-prerel (x86_64): FuncDiv_1.0.0.tgz, r-release (x86_64): FuncDiv_1.0.0.tgz


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